2019-01-04 13:55:22 +00:00
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//Profile config names for nf-core/configs
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params {
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2019-01-07 13:25:06 +00:00
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config_profile_description = 'BINAC cluster profile provided by nf-core/configs.'
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2019-01-04 13:55:22 +00:00
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config_profile_contact = 'Alexander Peltzer (@apeltzer)'
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config_profile_url = 'https://www.bwhpc-c5.de/wiki/index.php/Category:BwForCluster_BinAC'
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}
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2019-03-12 17:48:29 +00:00
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2018-11-23 15:56:34 +00:00
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singularity {
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2018-11-26 22:47:36 +00:00
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enabled = true
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2019-12-11 13:26:57 +00:00
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envWhitelist = 'TZ'
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2018-11-23 15:56:34 +00:00
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}
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process {
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2019-11-11 12:56:17 +00:00
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beforeScript = 'module load devel/singularity/3.4.2'
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2018-11-26 22:47:36 +00:00
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executor = 'pbs'
|
2020-02-07 13:53:43 +00:00
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queue = { task.memory >= 128.GB ? 'smp': task.time <= 20.m ? 'tiny' : task.time <= 48.h ? 'short' : task.time <= 168.h ? 'short' : 'long'}
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2018-11-23 15:56:34 +00:00
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}
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params {
|
2019-03-12 13:58:41 +00:00
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igenomes_base = '/nfsmounts/igenomes'
|
2019-10-28 12:21:41 +00:00
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max_memory = 1000.GB
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2018-11-23 15:56:34 +00:00
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max_cpus = 28
|
2019-10-28 12:12:31 +00:00
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max_time = 48.h
|
2018-11-23 15:56:34 +00:00
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}
|
2019-10-08 12:19:42 +00:00
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weblog{
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enabled = true
|
2019-10-10 10:56:39 +00:00
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url = 'https://services.qbic.uni-tuebingen.de/flowstore/workflows'
|
2019-10-08 12:19:42 +00:00
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}
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