2019-01-04 13:55:22 +00:00
|
|
|
//Profile config names for nf-core/configs
|
|
|
|
|
params {
|
2019-01-07 13:25:06 +00:00
|
|
|
config_profile_description = 'QBiC Core Facility cluster profile provided by nf-core/configs.'
|
2020-03-23 16:16:34 +00:00
|
|
|
config_profile_contact = 'Gisela Gabernet (@ggabernet)'
|
2019-01-04 13:55:22 +00:00
|
|
|
config_profile_url = 'http://qbic.uni-tuebingen.de/'
|
|
|
|
|
}
|
2018-11-23 15:56:34 +00:00
|
|
|
|
|
|
|
|
singularity {
|
2018-11-26 16:32:06 +00:00
|
|
|
enabled = true
|
2019-10-08 11:20:58 +00:00
|
|
|
cacheDir = '/nfsmounts/container'
|
2018-11-23 15:56:34 +00:00
|
|
|
}
|
|
|
|
|
|
|
|
|
|
process {
|
2018-11-26 16:32:06 +00:00
|
|
|
executor = 'slurm'
|
2022-09-18 10:06:37 +00:00
|
|
|
queue = 'qbic'
|
2020-05-04 15:09:43 +00:00
|
|
|
scratch = 'true'
|
2018-11-23 15:56:34 +00:00
|
|
|
}
|
|
|
|
|
|
2019-07-03 07:21:16 +00:00
|
|
|
weblog{
|
|
|
|
|
enabled = true
|
2019-10-10 10:56:39 +00:00
|
|
|
url = 'https://services.qbic.uni-tuebingen.de/flowstore/workflows'
|
2019-07-03 07:21:16 +00:00
|
|
|
}
|
|
|
|
|
|
2018-11-23 15:56:34 +00:00
|
|
|
params {
|
2019-03-12 13:58:41 +00:00
|
|
|
igenomes_base = '/nfsmounts/igenomes'
|
2020-03-06 09:25:08 +00:00
|
|
|
max_memory = 1999.GB
|
|
|
|
|
max_cpus = 128
|
2018-11-23 15:56:34 +00:00
|
|
|
max_time = 140.h
|
|
|
|
|
}
|
