mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-11 04:23:10 +00:00
27 lines
527 B
Text
27 lines
527 B
Text
|
//Profile config names for nf-core/configs
|
||
|
|
params {
|
||
|
|
config_profile_description = 'Cedars-Sinai Medical Center HPC Profile'
|
||
|
|
config_profile_contact = 'Alex Rajewski (@rajewski)'
|
||
|
|
config_profile_url = 'https://www.cedars-sinai.edu/research/cores/informatics-computing/resources.html'
|
||
|
|
max_memory = 90.GB
|
||
|
|
max_cpus = 10
|
||
|
|
max_time = 240.h
|
||
|
|
}
|
||
|
|
|
||
|
|
// Specify the queing system
|
||
|
|
executor {
|
||
|
|
name = "sge"
|
||
|
|
}
|
||
|
|
|
||
|
|
process {
|
||
|
|
penv = 'smp'
|
||
|
|
beforeScript =
|
||
|
|
"""
|
||
|
|
module load 'singularity/3.6.0'
|
||
|
|
"""
|
||
|
|
}
|
||
|
|
|
||
|
|
singularity {
|
||
|
|
enabled = true
|
||
|
|
}
|