nf-configs/conf/computerome.config

//Profile config names for nf-core/configs
params {
  config_profile_description = 'Computerome 2.0 cluster profile provided by nf-core/configs.'
  config_profile_contact = 'Marc Trunjer Kusk Nielsen (@marcmtk)'
  config_profile_url = 'https://www.computerome.dk/'
  project = null
}

singularity {
  enabled = true
  autoMounts = true
  cacheDir = { "/home/projects/$params.project/scratch" }
}

process {
  beforeScript = { "module load tools singularity/3.8.0; export _JAVA_OPTIONS=-Djava.io.tmpdir=/home/projects/$params.project/scratch" }
  executor = 'pbs'
  clusterOptions = { "-A $params.project -W group_list=$params.project" }
}

params {
  max_memory = 1500.GB
  max_cpus = 40
  max_time = 168.h
}