millironx/nf-configs
1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-12-31 11:42:12 -05:00
Code Issues Releases Packages Activity

Create computerome.config

Browse source
This commit is contained in:
Marc Trunjer Kusk Nielsen 2021-08-31 13:58:39 +02:00 committed by GitHub
parent 3d77ffdf55
commit fdac67afbf
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
1 changed files with 26 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

26
conf/computerome.config Normal file
View file

@ -0,0 +1,26 @@
singularityDir = "/gpfs/scratch/${USER}/singularity_images_nextflow"
//Profile config names for nf-core/configs
params {
config_profile_description = 'Computerome 2.0 cluster profile provided by nf-core/configs.'
config_profile_contact = 'Marc Trunjer Kusk Nielsen (@marcmtk)'
config_profile_url = 'https://www.computerome.dk/'
}
singularity {
enabled = true
autoMounts = true
cacheDir = singularityDir
}
process {
beforeScript = 'module load singularity squashfs-tools'
executor = 'pbs'
queue = { task.memory >= 192.GB ? 'fatnode': 'thinnode'}
}
params {
max_memory = 1500.GB
max_cpus = 40
max_time = 168.h
}