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Add in sample datastorage for Illumina Platinum genomes.
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2 changed files with 5 additions and 5 deletions
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@ -4,11 +4,11 @@ params {
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config_profile_contact = 'Venkat Malladi (@vsmalladi)'
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config_profile_url = 'https://azure.microsoft.com/services/batch/'
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az_location = 'westeurope'
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az_location = 'westus2'
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batch_name = false
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batch_key = false
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storage_name = 'nextflow-test'
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storage_key = 'aepeL0FVpPKAM7i9F1F68p9n//0zi+xE1vNStbHD3sVJjqfGqtDd007UxaTUaCqaClHLWEj8JG2HV0AnTLVDaA=='
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storage_name = 'datasetplatinumgenomes'
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sas_token = 'sv=2019-02-02&se=2050-01-01T08%3A00%3A00Z&si=prod&sr=c&sig=FFfZ0QaDcnEPQmWsshtpoYOjbzd4jtwIWeK%2Fc4i9MqM%3D'
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}
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docker {
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@ -21,6 +21,6 @@ azure.batch.accountName = params.batch_name
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azure.batch.accountKey = params.batch_key
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azure.batch.autoPoolMode = true
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azure.storage.accountName = params.storage_name
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azure.storage.accountKey = params.storage_key
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azure.storage.sasToken = params.sas_token
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workDir = 'az://work'
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process.executor = 'azurebatch'
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@ -1,7 +1,7 @@
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# nf-core/configs: azurebatch Configuration
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To be used with the `azurebatch` profile by specifying the `-profile azurebatch` when running nf-core pipelines.
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Custom queue and storage need to be supplied with `params.az_location`, `params.batch_name`, `params.batch_key`, `params.storage_name`, `params.storage_key`.
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Custom queue and storage need to be supplied with `params.az_location`, `params.batch_name`, `params.batch_key`, `params.storage_name`, `params.sas_token`.
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## Azure Batch Setup
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