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Remove ceh profile for now

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James A. Fellows Yates 2021-01-21 13:15:08 +01:00 committed by GitHub
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commit 26d164ca74
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1 changed files with 24 additions and 29 deletions
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53
conf/seg_globe.config
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@ -1,32 +1,27 @@
//Profile config names for nf-core/configs
params {
config_profile_description = 'Section for Evolutionary Genomics @ GLOBE, University of Copenhagen - seg_globe profile provided by nf-core/configs.'
config_profile_contact = 'Aashild Vaagene (@ashildv)'
config_profile_url = 'https://globe.ku.dk/research/evogenomics/'
}
params {
config_profile_description = 'Section for Evolutionary Genomics @ GLOBE, University of Copenhagen - seg_globe profile provided by nf-core/configs.'
config_profile_contact = 'Aashild Vaagene (@ashildv)'
config_profile_url = 'https://globe.ku.dk/research/evogenomics/'
max_memory = 250.GB
max_cpus = 35
max_time = 720.h
}
profiles {
ceh {
singularity {
enabled = true
autoMounts = true
cacheDir = '/shared/volume/hologenomics/data/cache/nf-eager/singularity'
}
process {
executor = 'slurm'
queue = { task.time < 24.h ? 'hologenomics-short' : task.time < 168.h ? 'hologenomics' : 'hologenomics-long' }
}
singularity {
enabled = true
autoMounts = true
cacheDir = '/shared/volume/hologenomics/data/cache/nf-eager/singularity'
}
process {
executor = 'slurm'
queue = { task.time < 24.h ? 'hologenomics-short' : task.time < 168.h ? 'hologenomics' : 'hologenomics-long' }
}
cleanup = true
executor {
queueSize = 8
}
params {
max_memory = 250.GB
max_cpus = 35
max_time = 720.h
}
}
}
cleanup = true
executor {
queueSize = 8
}