millironx/nf-configs
1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-21 08:16:03 +00:00
Code Issues Releases Packages Activity

Remove ceh profile for now

Browse source
This commit is contained in:
James A. Fellows Yates 2021-01-21 13:15:08 +01:00 committed by GitHub
parent c4604450d8
commit 26d164ca74
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
1 changed files with 24 additions and 29 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

49
conf/seg_globe.config
View file

@ -1,32 +1,27 @@
//Profile config names for nf-core/configs
params {
config_profile_description = 'Section for Evolutionary Genomics @ GLOBE, University of Copenhagen - seg_globe profile provided by nf-core/configs.'
config_profile_contact = 'Aashild Vaagene (@ashildv)'
config_profile_url = 'https://globe.ku.dk/research/evogenomics/'
}
params {
config_profile_description = 'Section for Evolutionary Genomics @ GLOBE, University of Copenhagen - seg_globe profile provided by nf-core/configs.'
config_profile_contact = 'Aashild Vaagene (@ashildv)'
config_profile_url = 'https://globe.ku.dk/research/evogenomics/'
max_memory = 250.GB
max_cpus = 35
max_time = 720.h
}
profiles {
ceh {
singularity {
enabled = true
autoMounts = true
cacheDir = '/shared/volume/hologenomics/data/cache/nf-eager/singularity'
}
process {
executor = 'slurm'
queue = { task.time < 24.h ? 'hologenomics-short' : task.time < 168.h ? 'hologenomics' : 'hologenomics-long' }
}
singularity {
enabled = true
autoMounts = true
cacheDir = '/shared/volume/hologenomics/data/cache/nf-eager/singularity'
}
cleanup = true
process {
executor = 'slurm'
queue = { task.time < 24.h ? 'hologenomics-short' : task.time < 168.h ? 'hologenomics' : 'hologenomics-long' }
}
executor {
queueSize = 8
}
params {
max_memory = 250.GB
max_cpus = 35
max_time = 720.h
}
}
}
cleanup = true
executor {
queueSize = 8
}