millironx/nf-configs
1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-13 05:03:10 +00:00
Code Issues Releases Packages Activity

Markdown linting

Browse source
This commit is contained in:
James Fellows Yates 2021-04-06 17:53:27 +02:00
parent be1d35840d
commit 60c66d93ac
2 changed files with 2 additions and 2 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

2
docs/eva.md
View file

@ -25,4 +25,4 @@ Note the following characteristics of this profile:
### debug
This simple profile just turns off automatic clean up of intermediate files. This can be useful for debugging. Specify e.g. with `-profile eva,archgen`
This simple profile just turns off automatic clean up of intermediate files. This can be useful for debugging. Specify e.g. with `-profile eva,archgen`.

2
docs/pipeline/eager/eva.md
View file

@ -31,4 +31,4 @@ Specific configurations for eva has been made for eager.
#### Pathogen
- `pathogen_loose`: optimised for mapping of human aDNA reads (i.e. bwa aln defaults as `-l 16 -n 0.01`)
- `pathogen_strict`: optimised for mapping of human aDNA reads (i.e. bwa aln defaults as `-l 32, -n 0.1`)
- `pathogen_strict`: optimised for mapping of human aDNA reads (i.e. bwa aln defaults as `-l 32, -n 0.1`)