millironx/nf-configs
1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-25 17:29:55 +00:00
Code Issues Releases Packages Activity

Clarified where to store singularity images

Browse source
This commit is contained in:
Gwenna Breton 2022-08-08 16:04:21 +02:00 committed by GitHub
parent 6aa78833c3
commit 648025c1ce
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
1 changed files with 2 additions and 2 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

4
docs/medair.md
View file

@ -24,9 +24,9 @@ source activate nf-core
### Storage of Singularity images ### Storage of Singularity images
When downloading a nf-core pipeline for the first time (or a specific version of a pipeline), you can choose to store the Singularity image for future use. A central location for these images is: `/apps/bio/dependencies/nf-core/singularities`. When downloading a nf-core pipeline for the first time (or a specific version of a pipeline), you can choose to store the Singularity image for future use. We chose to have a central location for these images on medair: `/apps/bio/dependencies/nf-core/singularities`.
If you run or add the following to your `.bashrc`, Nexflow will know where to store the images: For Nexflow to know where to store new images, run or add the following to your `.bashrc`:
```bash ```bash
export NXF_SINGULARITY_CACHEDIR="/apps/bio/dependencies/nf-core/singularities" export NXF_SINGULARITY_CACHEDIR="/apps/bio/dependencies/nf-core/singularities"