1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-13 05:03:10 +00:00

Added info about Sentieon singularities

This commit is contained in:
Gwenna Breton 2022-07-07 14:24:15 +02:00 committed by GitHub
parent 4538e8aa36
commit 6b9cdc8ef3
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23

View file

@ -64,3 +64,7 @@ For example, the following job would run with the `wgs` profile:
```bash
run nextflow nf-core/raredisease -profile medair,wgs
```
### Sentieon
In some pipelines (sarek, raredisease) it is possible to use Sentieon for alignment and variant calling. If ones uses the label `sentieon` for running a process, the config file contains the path to the Sentieon singularity image on Medair.