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Merge pull request #288 from nf-core/TCLamnidis-patch-1
added 1240k profile
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commit
7f94989b39
1 changed files with 22 additions and 0 deletions
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@ -472,4 +472,26 @@ profiles {
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bwaalnl = 16500
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bwaalnl = 16500
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}
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}
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}
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}
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1240k {
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params {
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// Specific nf-core/configs params
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config_profile_contact = 'Thiseas C. Lamnidis (@TCLamnidis)'
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config_profile_description = 'nf-core/eager 1240k data EVA profile provided by nf-core/configs'
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}
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executor {
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queueSize = 6
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}
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process {
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// Increasing walltime for bwa to avoid unnecessary retries
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withName:bwa {
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time = { task.attempt == 3 ? 1440.h : task.attempt == 2 ? 72.h : 48.h }
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}
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withName:markduplicates {
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memory = { task.attempt == 3 ? 16.GB : task.attempt == 2 ? 8.GB : 4.GB }
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}
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}
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}
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}
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}
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