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Committing changes made by Brandon Wilk so that singularity containers will use scratch space
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@ -5,9 +5,15 @@ params {
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config_profile_url = 'https://www.uab.edu/cores/ircp/bds'
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}
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env {
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TMPDIR="$USER_SCRATCH"
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SINGULARITY_TMPDIR="$USER_SCRATCH"
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}
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singularity {
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enabled = true
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autoMounts = true
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runOptions = "--contain --workdir $USER_SCRATCH"
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}
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process {
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