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Merge pull request #287 from mahesh-panchal/add_snic_tmp

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Add SNIC_TMP to config
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Mahesh Binzer-Panchal 2021-10-11 10:38:50 +02:00 committed by GitHub
commit 8d68d76a44
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conf/uppmax.config
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@ -10,6 +10,7 @@ params {
singularity { singularity {
enabled = true enabled = true
envWhitelist = 'SNIC_TMP'
} }
def hostname = "r1" def hostname = "r1"
@ -49,6 +50,8 @@ def clusterOptionsCreator = { m ->
process { process {
executor = 'slurm' executor = 'slurm'
clusterOptions = { clusterOptionsCreator(task.memory) } clusterOptions = { clusterOptionsCreator(task.memory) }
// Use node local storage for execution.
scratch = '$SNIC_TMP'
} }
params { params {