millironx/nf-configs
1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-25 17:29:55 +00:00
Code Issues Releases Packages Activity

Update cfc.config

Browse source 
We just added some new HighMem nodes to the cfc, Partition/queue name is qbic, each node has 128Cores and 2TB of RAM.
The old queue (Name compute) is set to default by slurm.
Each process over 60GB of RAM or over 20cpus should run on those new nodes.
So added the queue State and adjusted the max_memory and max_cpu setting.
This commit is contained in:
mseybold 2020-03-06 10:25:08 +01:00 committed by GitHub
parent cd1932e9bb
commit 8e42bbd7d0
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
1 changed files with 3 additions and 2 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

5
conf/cfc.config
View file

@ -13,6 +13,7 @@ singularity {
process { process {
beforeScript = 'module load devel/singularity/3.4.2' beforeScript = 'module load devel/singularity/3.4.2'
executor = 'slurm' executor = 'slurm'
queue = { task.memory > 60.GB || task.cpus > 20 ? 'qbic' }
} }
weblog{ weblog{
@ -22,7 +23,7 @@ weblog{
params { params {
igenomes_base = '/nfsmounts/igenomes' igenomes_base = '/nfsmounts/igenomes'
max_memory = 498.GB max_memory = 1999.GB
max_cpus = 20 max_cpus = 128
max_time = 140.h max_time = 140.h
} }