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Merge pull request #8 from phue/mendel-config
add config for MENDEL cluster
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commit
92d32db708
2 changed files with 21 additions and 0 deletions
20
conf/mendel.config
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20
conf/mendel.config
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/*
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* --------------------------------------------------------------------------------------
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* Nextflow config file for the MENDEL cluster at the Gregor Mendel Institute in Vienna
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* -------------------------------------------------------------------------------------
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*/
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singularity {
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enabled = true
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}
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process {
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beforeScript = 'module load Singularity'
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executor = 'pbs'
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clusterOptions = { "-P $params.project" }
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}
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params {
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max_time = 192.h
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igenomesIgnore = true
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}
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@ -17,6 +17,7 @@ profiles {
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crick { includeConfig "${config_base}/crick.config" }
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gis { includeConfig "${config_base}/gis.config" }
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hebbe { includeConfig "${config_base}/hebbe.config" }
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mendel { includeConfig "${config_base}/mendel.config" }
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phoenix { includeConfig "${config_base}/pheonix.config" }
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uct_hex { includeConfig "${config_base}/uct_hex.config" }
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uppmax_devel { includeConfig "${config_base}/uppmax.config"
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