millironx/nf-configs
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added JAX conf

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This commit is contained in:
Asaf Peer 2021-03-21 06:47:52 -04:00
parent 2ce1e2a9cc
commit 93bde78faa
3 changed files with 3 additions and 1 deletions
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2
.github/workflows/main.yml vendored
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@ -16,7 +16,7 @@ jobs:
needs: test_all_profiles needs: test_all_profiles
strategy: strategy:
matrix: matrix:
profile: ['abims', 'awsbatch', 'bi','bigpurple', 'binac', 'cbe', 'ccga_dx', 'ccga_med', 'cfc', 'cfc_dev', 'crick', 'denbi_qbic', 'ebc', 'genotoul', 'genouest', 'gis', 'google', 'hebbe', 'icr_davros', 'ifb_core', 'imperial', 'imperial_mb', 'kraken', 'mpcdf', 'munin', 'oist', 'pasteur', 'phoenix', 'prince', 'seg_globe', 'shh', 'uct_hpc', 'uppmax', 'utd_ganymede', 'uzh'] profile: ['abims', 'awsbatch', 'bi','bigpurple', 'binac', 'cbe', 'ccga_dx', 'ccga_med', 'cfc', 'cfc_dev', 'crick', 'denbi_qbic', 'ebc', 'genotoul', 'genouest', 'gis', 'google', 'hebbe', 'icr_davros', 'ifb_core', 'imperial', 'imperial_mb', 'jax', 'kraken', 'mpcdf', 'munin', 'oist', 'pasteur', 'phoenix', 'prince', 'seg_globe', 'shh', 'uct_hpc', 'uppmax', 'utd_ganymede', 'uzh']
steps: steps:
- uses: actions/checkout@v1 - uses: actions/checkout@v1
- name: Install Nextflow - name: Install Nextflow

1
README.md
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@ -113,6 +113,7 @@ Currently documentation is available for the following systems:
* [GOOGLE](docs/google.md) * [GOOGLE](docs/google.md)
* [HEBBE](docs/hebbe.md) * [HEBBE](docs/hebbe.md)
* [ICR_DAVROS](docs/icr_davros.md) * [ICR_DAVROS](docs/icr_davros.md)
* [JAX](docs/jax.md)
* [KRAKEN](docs/kraken.md) * [KRAKEN](docs/kraken.md)
* [MPCDF](docs/mpcdf.md) * [MPCDF](docs/mpcdf.md)
* [MUNIN](docs/munin.md) * [MUNIN](docs/munin.md)

1
nfcore_custom.config
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@ -46,6 +46,7 @@ profiles {
uppmax { includeConfig "${params.custom_config_base}/conf/uppmax.config" } uppmax { includeConfig "${params.custom_config_base}/conf/uppmax.config" }
utd_ganymede { includeConfig "${params.custom_config_base}/conf/utd_ganymede.config" } utd_ganymede { includeConfig "${params.custom_config_base}/conf/utd_ganymede.config" }
uzh { includeConfig "${params.custom_config_base}/conf/uzh.config" } uzh { includeConfig "${params.custom_config_base}/conf/uzh.config" }
jax { includeConfig "${params.custom_config_base}/conf/jax.config" }
} }
// If user hostnames contain one of these substring and they are // If user hostnames contain one of these substring and they are