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Added PileupSummariesForMutect2 in CPU limit list
Add PileupSummariesForMutect2 to the list to run with less threads. Changed the MaxForks to 12 Tested on an internal sample and it worked!
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1 changed files with 3 additions and 2 deletions
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@ -20,9 +20,10 @@ process {
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maxForks = 46
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maxForks = 46
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// Limit cpus for Mutect2
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// Limit cpus for Mutect2
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withName:'Mutect2|Mutect2Single' {
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process {
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withName:'Mutect2|Mutect2Single|PileupSummariesForMutect2' {
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time = {48.h * task.attempt}
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time = {48.h * task.attempt}
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maxForks = 23
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maxForks = 12
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}
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}
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}
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}
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