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Java overhead process list updated

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Added HaplotypeCaller and GenotypeGVCFs to set of processes that need Java overhead
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ameynert 2021-03-30 16:15:17 +01:00 committed by GitHub
parent 700776f759
commit adfb5366b9
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conf/pipeline/sarek/eddie.config
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@ -24,4 +24,10 @@ process {
withName:GatherBQSRReports { withName:GatherBQSRReports {
clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"} clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"}
} }
withName:HaplotypeCaller {
clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"}
}
withName:GenotypeGVCFs {
clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"}
}
} }