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Merge pull request #168 from piotr-faba-ardigen/add_bi_config

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Fix bi config
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piotr-faba-ardigen 2020-07-07 14:56:43 +02:00 committed by GitHub
commit ba24f1a1c8
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1 changed files with 7 additions and 13 deletions
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16
conf/bi.config
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@ -4,17 +4,11 @@ params{
config_profile_url = 'https://www.boehringer-ingelheim.com/'
}
params.globalConfig = set_global_config()
def set_global_config() {
def config = System.getenv('NXF_GLOBAL_CONFIG')
if(config == null)
{
params.globalConfig = System.getenv('NXF_GLOBAL_CONFIG')
if(params.globalConfig == null)
{
def errorMessage = "WARNING: For bi.config requires NXF_GLOBAL_CONFIG env var to be set. Point it to global.config file if you want to use this profile."
System.err.println(errorMessage)
}else{
includeConfig config
}
return config
}else{
includeConfig params.globalConfig
}