Merge remote-tracking branch 'origin'

conf/shh.config

@@ -15,7 +15,6 @@ cleanup = true
 singularity {
     enabled = true
     autoMounts = true
-    runOptions = '-B /run/shm:/run/shm'
     cacheDir = "/projects1/singularity_scratch/cache/"
 }
 

docs/google.md

@@ -14,21 +14,21 @@ nextflow run nf-core/rnaseq -profile test,google --google_bucket <gs://your_buck
 
 ### Required Parameters
 
-#### `--google-bucket`
+#### `--google_bucket`
 
 The Google Cloud Storage bucket location to be used as a Nextflow work directory. Can also be specified with (`-w gs://your_bucket/work`).
 
 ### Optional Parameters
 
-#### `--google-zone`
+#### `--google_zone`
 
 The Google zone where the computation is executed in Compute Engine VMs. Multiple zones can be provided separating them by a comma. Default (`europe-west2-c`).
 
-#### `--google-preemptible`
+#### `--google_preemptible`
 
 Enables the usage of preemptible virtual machines with a retry error statergy for up to 5 retries. Default (`true`).
 
-#### `--google-debug`
+#### `--google_debug`
 
 Copies the /google debug directory from the VM to the task bucket directory. Useful for debugging. Default (`false`).