Patrick Hüther
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8a9c321e44
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Merge pull request #90 from phue/cbe_iGenomes
cbe: roll out iGenomes
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2019-11-26 18:15:30 +01:00 |
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phue
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672f025639
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cbe: add documentation about iGenomes
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2019-11-26 18:09:20 +01:00 |
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phue
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88b5be3060
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Merge branch 'master' of https://github.com/nf-core/configs into cbe_iGenomes
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2019-11-26 18:08:43 +01:00 |
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Alexander Peltzer
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ee99d7f2d4
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Merge pull request #94 from apeltzer/master
Mini Cosmetic Fixes for README
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2019-11-26 16:24:30 +01:00 |
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Alexander Peltzer
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b756ce54a4
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Add genotoul fix
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2019-11-26 16:09:08 +01:00 |
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Alexander Peltzer
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81739a3907
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Merge pull request #93 from jfy133/master
Updated max resources for SHH SDAG
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2019-11-26 15:56:39 +01:00 |
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Alexander Peltzer
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da922b8005
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Fix README
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2019-11-26 15:45:33 +01:00 |
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Alexander Peltzer
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5806cd14e8
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Merge branch 'master' of https://github.com/nf-core/configs
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2019-11-26 15:36:07 +01:00 |
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James A. Fellows Yates
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89506a653c
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Remove empty lines in block quotes for linting
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2019-11-26 15:34:25 +01:00 |
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Alexander Peltzer
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caa979f102
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Merge pull request #86 from genotoul-bioinfo/master
Add genotoul config
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2019-11-26 15:31:02 +01:00 |
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James A. Fellows Yates
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12ec22838c
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Specified max sources currently at SDAG limits (exceeds cdag)
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2019-11-26 15:29:03 +01:00 |
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James A. Fellows Yates
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c3d27099ca
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Updated authors
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2019-11-26 15:26:05 +01:00 |
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James A. Fellows Yates
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ca6ddcadb0
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Matching max CPUs to SDAG (supercruncher8)
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2019-11-26 15:25:35 +01:00 |
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James A. Fellows Yates
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c7c8c096f8
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Merge pull request #4 from nf-core/master
Syncing
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2019-11-26 15:24:44 +01:00 |
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Alexander Peltzer
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9e6e4343d7
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Merge branch 'master' into master
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2019-11-26 15:13:32 +01:00 |
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Alexander Peltzer
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9cb5137ef2
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Better description
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2019-11-26 15:12:42 +01:00 |
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Phil Ewels
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171c103e20
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Merge pull request #92 from apeltzer/master
GithubActions: Ignore CZI Profiles for now
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2019-11-26 15:11:49 +01:00 |
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Noirot Céline
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0fdcf8c70c
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Update .github/workflows/main.yml
Co-Authored-By: Alexander Peltzer <apeltzer@users.noreply.github.com>
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2019-11-26 15:10:13 +01:00 |
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Alexander Peltzer
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5c39c1ed1a
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Merge branch 'master' into master
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2019-11-26 15:07:31 +01:00 |
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noirot
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07b1f17d6a
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correct md to pass linter
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2019-11-26 15:02:06 +01:00 |
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noirot
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3d8da62db3
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add genotoul profile name to the build matrix
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2019-11-26 14:57:17 +01:00 |
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Noirot Céline
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3ed206b7a7
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Update docs/genotoul.md
ok
Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>
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2019-11-26 14:52:45 +01:00 |
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Noirot Céline
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288294994e
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Update docs/genotoul.md
ok
Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>
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2019-11-26 14:52:32 +01:00 |
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Noirot Céline
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611c318569
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Update conf/genotoul.config
Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>
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2019-11-26 14:50:05 +01:00 |
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Noirot Céline
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dd4ff452da
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Update conf/genotoul.config
Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>
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2019-11-26 14:49:47 +01:00 |
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noirot
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e95196451f
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correct md to pass linter
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2019-11-26 14:47:23 +01:00 |
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noirot
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42c949db95
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correct md to pass linter
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2019-11-26 14:43:42 +01:00 |
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Alexander Peltzer
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bac91d03fa
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Ignore czi stuff for now
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2019-11-26 14:38:57 +01:00 |
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Alexander Peltzer
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8ca2e808b4
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Merge pull request #91 from apeltzer/master
Fix Github Actions tests
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2019-11-26 14:34:53 +01:00 |
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Alexander Peltzer
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37c6714cc7
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Nice prince
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2019-11-26 14:29:52 +01:00 |
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Alexander Peltzer
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2ebd2180ed
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Add in SCRATCH env
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2019-11-26 14:27:22 +01:00 |
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phue
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bdf4a829b8
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roll out iGenomes on cbe
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2019-11-26 14:22:16 +01:00 |
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Alexander Peltzer
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23f9fd2d73
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Merge branch 'master' into master
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2019-11-26 14:20:36 +01:00 |
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Alexander Peltzer
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47ac2085f7
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Better names
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2019-11-26 14:12:41 +01:00 |
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Alexander Peltzer
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0afe00ded5
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Generalize name
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2019-11-26 14:12:19 +01:00 |
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Alexander Peltzer
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c3c7c74d79
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Better code
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2019-11-26 14:11:16 +01:00 |
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Alexander Peltzer
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dea11df453
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Both on PR and on push
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2019-11-26 14:07:25 +01:00 |
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Alexander Peltzer
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ebb89f2714
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Don't check that anymore
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2019-11-26 14:06:30 +01:00 |
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Alexander Peltzer
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cfc30418b2
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Merge branch 'master' of https://github.com/apeltzer/configs
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2019-11-26 14:05:09 +01:00 |
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Alexander Peltzer
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9caf9821c9
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Use strip
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2019-11-26 14:04:58 +01:00 |
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Alexander Peltzer
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d592c79954
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Merge branch 'master' into master
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2019-11-26 13:59:06 +01:00 |
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Alexander Peltzer
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cb876594a3
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Proper user tests now :-)
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2019-11-26 13:57:32 +01:00 |
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Noirot Céline
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42d99e7006
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Update genotoul.md
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2019-11-26 13:18:34 +01:00 |
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Alexander Peltzer
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00db62416f
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Merge pull request #89 from MaxUlysse/AWSBATCH
Fix issues with awsbatch profile
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2019-11-26 11:23:15 +01:00 |
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Maxime Garcia
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1ce8ce0c55
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Apply suggestions from code review
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2019-11-26 11:00:24 +01:00 |
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MaxUlysse
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75c1fd5cd9
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fix tests
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2019-11-26 10:43:23 +01:00 |
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Alexander Peltzer
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7e3efcac5c
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Enjoy
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2019-11-26 00:59:09 +01:00 |
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Alexander Peltzer
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b60fa8109e
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Shift some configs to params scope
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2019-11-26 00:57:10 +01:00 |
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Alexander Peltzer
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3d7f5436b1
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Its in workflows
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2019-11-26 00:54:17 +01:00 |
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Alexander Peltzer
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5a1dbf2dc7
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Rename configs tests
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2019-11-26 00:52:39 +01:00 |
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