millironx
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nf-configs
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  • bed950c735
         Merge pull request #433 from ameynert/master master ameynert 2022-10-26 16:56:49 +0200
  • 70e3eafeb1
         Merge pull request #6 from nf-core/master ameynert 2022-10-26 16:25:37 +0200
  • 32f31fe98a
         Merge pull request #432 from nf-core/update/vsc_ugent Matthias De Smet 2022-10-26 11:20:30 +0200
  • ec190ac013
         Update conf/vsc_ugent.config Matthias De Smet 2022-10-26 11:09:45 +0200
  • 81c5857c51
         Update vsc_ugent.config Matthias De Smet 2022-10-26 11:07:14 +0200
  • 68bb93ce9d
         Merge pull request #430 from athbaltzis/master Athanasios Baltzis 2022-10-21 14:11:18 +0200
  • 04bf413415
         Update main.yml Athanasios Baltzis 2022-10-21 14:03:40 +0200
  • 0a333e29b4
         Update nfcore_custom.config Athanasios Baltzis 2022-10-21 14:02:12 +0200
  • 002fc84362 Add crg custom config file and update nfcore_custom.config Athanasios Baltzis 2022-10-20 18:41:40 +0200
  • d2e82e4fd2 Add profile to main.yml Athanasios Baltzis 2022-10-20 18:15:51 +0200
  • 7547fba92e Add proteinfold-specific CRG config Athanasios Baltzis 2022-10-20 18:00:14 +0200
  • c40faeb95e
         Merge pull request #312 from nf-core/kevbrick-patch-1 Alexander Peltzer 2022-10-19 10:56:29 +0200
  • add5fc458a
         Merge pull request #264 from bwlang/varskip_designs Alexander Peltzer 2022-10-19 10:55:54 +0200
  • c2710b1b63
         Merge branch 'master' into varskip_designs Alexander Peltzer 2022-10-19 10:42:00 +0200
  • 211a1bcb73
         Merge branch 'master' into kevbrick-patch-1 Alexander Peltzer 2022-10-19 10:41:41 +0200
  • 1fe5d5d024
         Merge pull request #352 from ajodeh-juma/gis-branch Alexander Peltzer 2022-10-19 10:41:12 +0200
  • cdc095c4f1
         Merge branch 'master' into gis-branch Alexander Peltzer 2022-10-19 10:38:51 +0200
  • 7a24bb8d45
         Merge pull request #429 from chriswyatt1/ucl_myriad Alexander Peltzer 2022-10-19 10:35:40 +0200
  • f4c13e6511 fix_trainling_nl chriswyatt1 2022-10-18 14:10:55 +0000
  • 9b971c2b76 Ucl_myriad chriswyatt1 2022-10-18 14:03:07 +0000
  • 9a1e629b7b
         Merge pull request #428 from nf-core/vsc_ugent/limit_queuesize Matthias De Smet 2022-10-13 08:53:27 +0200
  • adbf728ce5
         vsc_ugent: limit queuesize Matthias De Smet 2022-10-13 07:54:30 +0200
  • 62a2860b0d
         Merge pull request #427 from nf-core/praveenraj2018-patch-1 Maxime U. Garcia 2022-10-10 16:41:55 +0200
  • 6e2a24bdd6
         Merge pull request #426 from Aratz/master Maxime U. Garcia 2022-10-10 16:39:58 +0200
  • 278ae391a0
         Apply suggestions from code review Adrien Coulier 2022-10-10 16:21:47 +0200
  • ec8d67285a Run prettier Adrien Coulier 2022-10-10 16:03:39 +0200
  • f200f6ab44
         Disable mounting of KI lab folders Praveen Raj S 2022-10-10 16:01:22 +0200
  • fb17e0c7f4 Explain how to install nf-core through modules Adrien Coulier 2022-10-10 14:30:56 +0200
  • 5c65e69941
         Merge pull request #424 from nf-core/demux-awstower Edmund Miller 2022-10-05 23:01:40 +0000
  • 33708acdc5
         docs(demultiplex): Add aws_tower docs Edmund Miller 2022-10-04 15:22:26 -0500
  • 0cabf67b61
         feat(demultiplex): Add optimized transfers for bases2fastq Edmund Miller 2022-10-04 15:09:56 -0500
  • 62d4e0d06b
         Merge pull request #425 from sheffield-bioinformatics-core/sbc_sharc Phil Ewels 2022-10-05 21:21:14 +0200
  • 755862fc61
         Merge branch 'nf-core:master' into sbc_sharc Lewis Quayle 2022-10-05 19:55:43 +0100
  • 540add8238
         Merge pull request #422 from giusmar/master Alexander Peltzer 2022-10-05 16:40:24 +0200
  • e2146b5905
         Update docs/tigem.md Alexander Peltzer 2022-10-05 09:59:07 +0200
  • 64fec62a6d
         Merge branch 'master' into master Giuseppe Martone 2022-10-04 22:59:17 +0200
  • e37bccc9d8
         Update tigem.config Giuseppe Martone 2022-10-04 22:58:50 +0200
  • baf857654c
         Update tigem.md Giuseppe Martone 2022-10-04 22:28:38 +0200
  • 8e217589b7
         Merge branch 'master' into gis-branch Alexander Peltzer 2022-10-04 21:59:27 +0200
  • 34441a8f82
         Update docs/gis.md Alexander Peltzer 2022-10-04 21:59:19 +0200
  • a9781042c7
         Merge pull request #392 from nf-core/custom-mag-eva Alexander Peltzer 2022-10-04 21:58:49 +0200
  • 0d8471a082
         Merge pull request #421 from Puumanamana/master Alexander Peltzer 2022-10-04 21:56:40 +0200
  • 8b68ffce89
         Merge branch 'master' into custom-mag-eva Alexander Peltzer 2022-10-04 21:55:37 +0200
  • cade84aacd [automated] Fix linting with Prettier nf-core-bot 2022-10-04 19:50:51 +0000
  • 7556391c97
         Merge pull request #423 from marchoeppner/ccga_beegfs_update Phil Ewels 2022-10-04 14:31:19 +0200
  • e78d941105
         Merge branch 'master' into ccga_beegfs_update Phil Ewels 2022-10-04 14:18:51 +0200
  • e5b798e21f Updating CCGA med to use the new Beegfs file system Marc Hoeppner 2022-10-04 14:07:44 +0200
  • 5758687a09
         Update main.yml Giuseppe Martone 2022-10-04 11:07:36 +0200
  • a4244eb346
         Update README.md Giuseppe Martone 2022-10-04 11:06:26 +0200
  • bde7502ed2
         Update nfcore_custom.config Giuseppe Martone 2022-10-04 10:54:13 +0200
  • 2479c1e7e8
         Update tigem.md Giuseppe Martone 2022-10-04 10:53:27 +0200
  • da0482a904
         Create tigem.md Giuseppe Martone 2022-10-04 10:52:50 +0200
  • ce39096f32
         Create tigem.config Giuseppe Martone 2022-10-04 10:44:19 +0200
  • 584052cfff Revised base and all pipeline configs to provide memory on per core basis lquayle88 2022-10-04 09:12:29 +0100
  • 3f2ffa314d Revised base and sarek configs to provide memory on per core basis lquayle88 2022-10-04 00:25:16 +0100
  • 2825f33ded
         conda env setup improvement Cedric 2022-10-02 19:15:59 -1000
  • d429a59a0d
         add automounts for singularity Cedric 2022-10-02 18:44:22 -1000
  • e89cb7bd5e fix indentation Cedric Arisdakessian 2022-10-03 03:49:04 +0000
  • 3b8b170203 added mana in gh actions Cedric Arisdakessian 2022-10-03 03:47:03 +0000
  • 9cc679c811 fix mana name Cedric Arisdakessian 2022-10-03 03:43:51 +0000
  • 7b1e360a35 added mana Cedric Arisdakessian 2022-10-03 03:42:07 +0000
  • 9b710a07f5 add mana config Cedric Arisdakessian 2022-10-03 03:41:23 +0000
  • 32cdea4b59 documentation for mana config Cedric Arisdakessian 2022-10-03 03:38:48 +0000
  • c479780d8f create mana config Cedric Arisdakessian 2022-10-03 03:38:20 +0000
  • e7ac3ecd19 Modified resource requests in sbc_sharc.config for sarek lquayle88 2022-10-02 00:24:39 +0100
  • 9b451b53b7 Increased cpus and memory for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek lquayle88 2022-10-01 23:31:51 +0100
  • 10c1490265 Increased memory and time for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek lquayle88 2022-10-01 23:15:13 +0100
  • dbb3b3b44b Reinstated maxRetries and increased memory for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek lquayle88 2022-10-01 07:43:46 +0100
  • 8103718389 Reduced maxRetries upon error in sbc_sharc.config for sarek lquayle88 2022-09-30 16:54:48 +0100
  • 1eea9b464a
         Merge branch 'nf-core:master' into sbc_sharc Lewis Quayle 2022-09-28 10:49:05 +0100
  • 57f63add02
         Merge pull request #417 from Sage-Bionetworks-Workflows/bgrande/sage-improve-downloads Bruno Grande 2022-09-26 10:24:14 -0700
  • 735df9ef76
         Merge branch 'master' into bgrande/sage-improve-downloads Bruno Grande 2022-09-26 10:22:27 -0700
  • 51ae760889
         Merge pull request #413 from phue/biohpc_charliecloud_patch Patrick Hüther 2022-09-25 23:28:04 +0200
  • e89114df8d
         Merge branch 'nf-core:master' into sbc_sharc Lewis Quayle 2022-09-23 17:02:29 +0100
  • c42a5a9a94 Updated resources requested by pipelines lquayle88 2022-09-23 17:01:58 +0100
  • 93978cd673
         Merge branch 'master' into gis-branch James A. Fellows Yates 2022-09-23 17:10:25 +0200
  • 2b1141e9c9
         Merge pull request #420 from SPPearce/crukmi James A. Fellows Yates 2022-09-23 15:14:43 +0200
  • ab1ad832df Updated resource requests for compatibility with high memory nodes lquayle88 2022-09-23 13:18:50 +0100
  • 17c3767fef
         Update crukmi.config Simon Pearce 2022-09-23 12:53:54 +0100
  • 7541ffb666
         Merge branch 'nf-core:master' into sbc_sharc Lewis Quayle 2022-09-23 11:09:28 +0100
  • 7e34beb3c9 Updated resource requests for compatibility with general worker nodes lquayle88 2022-09-23 11:08:39 +0100
  • 0d4ecaeb6d
         Merge pull request #419 from AdrijaK/master Martin Proks 2022-09-23 10:29:00 +0200
  • 798d845a0d run prettier AdrijaK 2022-09-22 14:21:02 +0200
  • 65b6bf7c62
         add ku_sund_dangpu Adrija Kalvisa 2022-09-22 13:37:45 +0200
  • 339a072884
         fix typo Adrija Kalvisa 2022-09-22 13:35:42 +0200
  • 55d7b3fc00
         add KU SUND DANGPU Adrija Kalvisa 2022-09-22 13:35:08 +0200
  • 5315ddd92f
         add KU_SUND_DANGPU Adrija Kalvisa 2022-09-22 13:22:26 +0200
  • ce916bf4b5
         fix typo Adrija Kalvisa 2022-09-22 13:21:10 +0200
  • 2e9578498a
         add ku_sund_dangpu.config Adrija Kalvisa 2022-09-22 13:20:42 +0200
  • 7959b14385
         Merge branch 'nf-core:master' into master Adrija Kalvisa 2022-09-22 13:15:32 +0200
  • 5400df135d
         Merge pull request #412 from nf-core/cheaha_env_variable_updates Austyn Trull 2022-09-21 13:38:24 -0500
  • 1471257aaf Modified config for job submit rate lquayle88 2022-09-20 19:51:31 +0100
  • 9ee0bdc580
         Merge branch 'nf-core:master' into sbc_sharc Lewis Quayle 2022-09-19 16:36:04 +0100
  • adc88cfa1f Added config for limiting queue size and job submit rate lquayle88 2022-09-19 16:30:30 +0100
  • 85aa6adeed
         Merge branch 'master' into biohpc_charliecloud_patch Patrick Hüther 2022-09-18 12:52:33 +0200
  • 89dc3c429f
         Merge pull request #418 from ggabernet/master Gisela Gabernet 2022-09-18 12:07:43 +0200
  • c709be3b59 update cfc config maintenance ggabernet 2022-09-18 12:06:37 +0200
  • 8bb9361359 Improve reliability of file transfers Bruno Grande 2022-09-17 10:14:04 -0700
  • 55971bb94d Modularised error handling strategy to per pipeline basis lquayle88 2022-09-16 17:29:08 +0100
  • c9c4d02f0d
         Merge pull request #416 from jfy133/master James A. Fellows Yates 2022-09-15 09:18:00 +0200