millironx/nf-configs
1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-24 09:09:56 +00:00
Code Issues Releases Packages Activity

Commit graph

  • 49cd35918a
         Remove whitespace Alexander Peltzer 2019-12-11 15:59:58 +0100
  • 5e6981d0ee
         Export TZ in binac config Alexander Peltzer 2019-12-11 15:59:25 +0100
  • 271e20e306
         Merge pull request #108 from nf-core/fix-env-binac Alexander Peltzer 2019-12-11 14:31:22 +0100
  • ac90acf470
         Update envWhiteList for Binac Profile for testing purposes Alexander Peltzer 2019-12-11 14:26:57 +0100
  • e429758e25
         Merge pull request #107 from nf-core/pipelineconfigs_readme_update Alexander Peltzer 2019-12-10 12:19:26 +0100
  • 71b47e3efa
         Updated README to include EAGER specific configs James A. Fellows Yates 2019-12-10 11:39:24 +0100
  • 09bc644dcf
         Merge pull request #106 from jfy133/master James A. Fellows Yates 2019-12-06 20:02:59 +0100
  • 0beb98696f
         Merge branch 'master' into master James A. Fellows Yates 2019-12-06 19:31:24 +0100
  • 8747be8120
         More tweaks, nextflow appears to add a little extra? James A. Fellows Yates 2019-12-06 19:27:16 +0100
  • 5c6760b2f0
         Tweak back again James A. Fellows Yates 2019-12-06 19:25:07 +0100
  • 46f6d20a77
         Put parameters back to correct levels James A. Fellows Yates 2019-12-06 19:13:29 +0100
  • 4b0fd12752
         Merge pull request #105 from nf-core/jfy133-patch-1 Phil Ewels 2019-12-06 19:12:50 +0100
  • 18931763fa
         Add space? James A. Fellows Yates 2019-12-06 19:11:08 +0100
  • f59443daf0
         Update shh.config James A. Fellows Yates 2019-12-06 19:09:20 +0100
  • 1ab1370872
         Try to make resources satisfiable James A. Fellows Yates 2019-12-06 19:06:05 +0100
  • 6e596d1730
         Fix stupid wrong bracket typo -.- James A. Fellows Yates 2019-12-06 18:37:39 +0100
  • b28e1a0905
         Wrong bracket typo fix -.- James A. Fellows Yates 2019-12-06 18:34:18 +0100
  • 1f7940c2ee
         Merge pull request #104 from jfy133/master Alexander Peltzer 2019-12-06 17:16:37 +0100
  • e8b4675692 Cleanup and tweaking jfy133 2019-12-06 13:17:31 +0100
  • 9497b78149
         Merge pull request #100 from MaxUlysse/UPPMAX Maxime Garcia 2019-12-06 10:52:44 +0100
  • 79528de92f
         Update docs/uppmax.md Maxime Garcia 2019-12-06 10:47:09 +0100
  • 14864bb80b
         Update conf/uppmax.config Maxime Garcia 2019-12-06 10:31:56 +0100
  • da547b4ce3
         Merge pull request #102 from phue/cbe_singularity Alexander Peltzer 2019-12-06 10:21:55 +0100
  • fa777180e6 cbe: map hostname phue 2019-12-05 23:46:25 +0100
  • 0033b74e4e
         Update shh.config James A. Fellows Yates 2019-12-05 18:08:39 +0100
  • dc0f1dfb40
         Update shh.config James A. Fellows Yates 2019-12-05 17:58:49 +0100
  • b1a8b45aa0
         Maybe typo? James A. Fellows Yates 2019-12-05 17:52:53 +0100
  • ab6c5f05ac
         Merge pull request #7 from nf-core/master James A. Fellows Yates 2019-12-05 17:37:17 +0100
  • 0467b44f21
         Merge pull request #103 from jfy133/master James A. Fellows Yates 2019-12-05 17:21:18 +0100
  • 1650080b6e Linting jfy133 2019-12-05 17:03:07 +0100
  • 731372dac2 Added SHH specific EAGER configuration jfy133 2019-12-05 17:01:10 +0100
  • 0a3821ce78
         Merge pull request #6 from nf-core/master James A. Fellows Yates 2019-12-05 16:14:52 +0100
  • 381c60e7b7 cbe: load singularity/3.4.1 phue 2019-12-05 16:06:32 +0100
  • a63ec24626 Merge branch 'UPPMAX' of github.com:MaxUlysse/nf-core_configs into UPPMAX MaxUlysse 2019-12-05 15:18:04 +0100
  • 99afe86ea9 update docs MaxUlysse 2019-12-05 15:18:01 +0100
  • f41d325873 automatic configs work on all nodes MaxUlysse 2019-12-05 15:07:59 +0100
  • 78826c9d4e
         Merge branch 'master' into UPPMAX Maxime Garcia 2019-12-05 12:52:34 +0100
  • 9cdb915efb
         Merge pull request #101 from jfy133/master Alexander Peltzer 2019-12-05 12:51:31 +0100
  • cf6e00d9f5 better match for hostname MaxUlysse 2019-12-05 12:46:32 +0100
  • 20e451be3b actually define hostname MaxUlysse 2019-12-05 12:45:30 +0100
  • 0211b33a55 trying automatic configuration based on hostname MaxUlysse 2019-12-05 12:41:18 +0100
  • 842642a2bb
         Apply suggestions from code review James A. Fellows Yates 2019-12-05 12:23:36 +0100
  • 678a3841b6
         Update conf/shh.config James A. Fellows Yates 2019-12-05 12:23:06 +0100
  • 3fc1377ff2 Remove mysterious new line jfy133 2019-12-05 12:16:01 +0100
  • 41a795f996 Fixed github actions test jfy133 2019-12-05 12:14:01 +0100
  • 54dafbcfa3 Condensing SHH profiles following https://github.com/nf-core/configs/pull/100 jfy133 2019-12-05 12:09:11 +0100
  • a79dfdf223 remove uppmax_devel profile MaxUlysse 2019-12-05 12:03:04 +0100
  • cdbdbee0eb replace -profile uppmax_devel by -profile uppmax,devel MaxUlysse 2019-12-05 11:49:44 +0100
  • 657345fa70
         Merge pull request #99 from nf-core/adjust_cfc_mem Alexander Peltzer 2019-11-28 13:35:47 +0100
  • 2eed8f7429 Lowered max. memory for cfc Sabrina Krakau 2019-11-28 12:49:02 +0100
  • fd68a2fbfb
         Merge pull request #98 from nf-core/olgabot-patch-1 Alexander Peltzer 2019-11-28 12:36:21 +0100
  • f57e00e87d
         Set awsqueue parameter properly Olga Botvinnik 2019-11-27 15:57:09 -0800
  • a7ac981cca
         Merge pull request #97 from apeltzer/master Sabrina Krakau 2019-11-27 14:58:14 +0100
  • 4f77eae5cf
         Mini adjustment for highmem queue on denbi Alexander Peltzer 2019-11-27 14:23:01 +0100
  • 64ff62de2c
         Merge pull request #85 from MaxUlysse/sarek Maxime Garcia 2019-11-27 13:38:45 +0100
  • 2669401a72
         Merge branch 'master' into sarek Maxime Garcia 2019-11-27 13:27:43 +0100
  • 752fca0530 fix level of hostname MaxUlysse 2019-11-27 13:25:52 +0100
  • 7f61d2f81b fix TOC MaxUlysse 2019-11-27 13:18:39 +0100
  • 8a73e7f2f8 better explanation MaxUlysse 2019-11-27 13:16:08 +0100
  • 5e0e3e0567
         Merge pull request #96 from jfy133/master Alexander Peltzer 2019-11-27 12:06:54 +0100
  • 54719c4761
         Merge pull request #95 from ggabernet/master Alexander Peltzer 2019-11-26 21:21:07 +0100
  • c725c71e4d
         Merge branch 'master' into master James A. Fellows Yates 2019-11-26 20:34:42 +0100
  • e1c8c86d70 Updated core config jfy133 2019-11-26 20:26:59 +0100
  • c89ca84244 Updated github actions test - typo fix jfy133 2019-11-26 20:24:23 +0100
  • e6bf470962 Updated github actions test jfy133 2019-11-26 20:23:04 +0100
  • 6f40c13473 Split shh config for each cluster jfy133 2019-11-26 20:20:17 +0100
  • 8a9c321e44
         Merge pull request #90 from phue/cbe_iGenomes Patrick Hüther 2019-11-26 18:15:30 +0100
  • 672f025639 cbe: add documentation about iGenomes phue 2019-11-26 18:09:20 +0100
  • 88b5be3060 Merge branch 'master' of https://github.com/nf-core/configs into cbe_iGenomes phue 2019-11-26 18:08:43 +0100
  • 834f4b4179 updated memory cfc config ggabernet 2019-11-26 17:30:41 +0100
  • 55d8e8aca8
         Merge pull request #1 from nf-core/master Gisela Gabernet 2019-11-26 17:12:53 +0100
  • ee99d7f2d4
         Merge pull request #94 from apeltzer/master Alexander Peltzer 2019-11-26 16:24:30 +0100
  • b756ce54a4
         Add genotoul fix Alexander Peltzer 2019-11-26 16:09:08 +0100
  • 81739a3907
         Merge pull request #93 from jfy133/master Alexander Peltzer 2019-11-26 15:56:39 +0100
  • da922b8005
         Fix README Alexander Peltzer 2019-11-26 15:45:33 +0100
  • 5806cd14e8
         Merge branch 'master' of https://github.com/nf-core/configs Alexander Peltzer 2019-11-26 15:36:07 +0100
  • 89506a653c
         Remove empty lines in block quotes for linting James A. Fellows Yates 2019-11-26 15:34:25 +0100
  • caa979f102
         Merge pull request #86 from genotoul-bioinfo/master Alexander Peltzer 2019-11-26 15:31:02 +0100
  • 12ec22838c
         Specified max sources currently at SDAG limits (exceeds cdag) James A. Fellows Yates 2019-11-26 15:29:03 +0100
  • c3d27099ca
         Updated authors James A. Fellows Yates 2019-11-26 15:26:05 +0100
  • ca6ddcadb0
         Matching max CPUs to SDAG (supercruncher8) James A. Fellows Yates 2019-11-26 15:25:35 +0100
  • c7c8c096f8
         Merge pull request #4 from nf-core/master James A. Fellows Yates 2019-11-26 15:24:44 +0100
  • 6f638b7ad4 Merge branch 'sarek' of github.com:MaxUlysse/nf-core_configs into sarek MaxUlysse 2019-11-26 15:22:02 +0100
  • 25f3bd68f8 container = null MaxUlysse 2019-11-26 15:21:53 +0100
  • 9e6e4343d7
         Merge branch 'master' into master Alexander Peltzer 2019-11-26 15:13:32 +0100
  • 9cb5137ef2
         Better description Alexander Peltzer 2019-11-26 15:12:42 +0100
  • 171c103e20
         Merge pull request #92 from apeltzer/master Phil Ewels 2019-11-26 15:11:49 +0100
  • 0fdcf8c70c
         Update .github/workflows/main.yml Noirot Céline 2019-11-26 15:10:13 +0100
  • 5c39c1ed1a
         Merge branch 'master' into master Alexander Peltzer 2019-11-26 15:07:31 +0100
  • 07b1f17d6a correct md to pass linter noirot 2019-11-26 15:02:06 +0100
  • 3d8da62db3 add genotoul profile name to the build matrix noirot 2019-11-26 14:57:17 +0100
  • 3ed206b7a7
         Update docs/genotoul.md Noirot Céline 2019-11-26 14:52:45 +0100
  • 288294994e
         Update docs/genotoul.md Noirot Céline 2019-11-26 14:52:32 +0100
  • 611c318569
         Update conf/genotoul.config Noirot Céline 2019-11-26 14:50:05 +0100
  • dd4ff452da
         Update conf/genotoul.config Noirot Céline 2019-11-26 14:49:47 +0100
  • e95196451f correct md to pass linter noirot 2019-11-26 14:47:23 +0100
  • 42c949db95 correct md to pass linter noirot 2019-11-26 14:43:42 +0100
  • bac91d03fa
         Ignore czi stuff for now Alexander Peltzer 2019-11-26 14:38:57 +0100
  • 8ca2e808b4
         Merge pull request #91 from apeltzer/master Alexander Peltzer 2019-11-26 14:34:53 +0100
  • 37c6714cc7
         Nice prince Alexander Peltzer 2019-11-26 14:29:52 +0100