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nf-configs/docs/pipeline/demultiplex/aws_tower.md

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nf-core/configs: AWS Tower Demultiplex specific configuration

Extra specific configuration for demultiplex pipeline

Usage

To use, run the pipeline with -profile aws_tower.

This will download and launch the demultiplex specific aws_tower.config which has been pre-configured with a setup suitable for AWS batch through tower.

Example: nextflow run nf-core/demultiplex -profile aws_tower

eager specific configurations for eva

Specific configurations for AWS has been made for demultiplex.

General profiles

  • The general AWS Tower profile runs with default nf-core/demultiplex parameters, but with modifications to account file transfer speed and optimized bases2fastq resources.