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nf-configs/docs/pipeline/taxprofiler/hasta.md

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nf-core/configs: eva taxprofiler specific configuration

Extra specific configuration for taxprofiler pipeline

Usage

To use, run the pipeline with -profile hasta.

This will download and launch the taxprofiler specific hasta.config which has been pre-configured with a setup suitable for the hasta cluster.

Example: nextflow run nf-core/taxprofiler -profile hasta

taxprofiler specific configurations for hasta

Specific configurations for hasta has been made for taxprofiler.

General profiles

  • The general hasta profile runs with default nf-core/taxprofiler parameters, but with modifications to account for issues with: BBDUK and MALT.