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nf-configs/conf/pasteur.config
phue 18ed48f398 deprecate igenomesIgnore in favor of igenomes_ignore
keep both for now until all the pipelines have been synced
2019-10-28 11:38:24 +01:00

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//Profile config names for nf-core/configs
params {
config_profile_description = 'The Institut Pasteur HPC cluster profile'
config_profile_contact = 'Remi Planel (@rplanel)'
config_profile_url = 'https://research.pasteur.fr/en/service/tars-cluster'
}
singularity {
enabled = true
autoMounts = true
runOptions = '-B /local/scratch:/tmp'
}
process {
executor = 'slurm'
}
params {
igenomes_ignore = true
igenomesIgnore = true //deprecated
max_memory = 256.GB
max_cpus = 28
max_time = 24.h
}