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nf-configs/docs/pipeline/rnafusion/munin.md
2020-04-28 17:06:04 +02:00

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# nf-core/configs: MUNIN rnafusion specific configuration
Extra specific configuration for rnafusion pipeline
## Usage
To use, run the pipeline with `-profile munin`.
This will download and launch the rnafusion specific [`munin.config`](../../../conf/pipeline/rnafusion/munin.config) which has been pre-configured with a setup suitable for the `MUNIN` cluster.
Example: `nextflow run nf-core/rnafusion -profile munin`
## rnafusion specific configurations for MUNIN
Specific configurations for `MUNIN` has been made for rnafusion.
* `cpus`, `memory` and `time` max requirements.
* Paths to specific references and indexes