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nf-configs/docs/pipeline/mag/eva.md
James A. Fellows Yates 97d57539e3
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Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>
2022-06-03 12:51:20 +02:00

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nf-core/configs: eva mag specific configuration

Extra specific configuration for mag pipeline

Usage

To use, run the pipeline with -profile eva.

This will download and launch the mag specific eva.config which has been pre-configured with a setup suitable for the MPI-EVA cluster.

Example: nextflow run nf-core/mag -profile eva

mag specific configurations for eva

Specific configurations for eva has been made for mag, primarily adjusting SGE memory requirements of Java tools (e.g. FastQC).