nf-configs/docs/pipeline/eager/shh.md

nf-core/configs: shh eager specific configuration

Extra specific configuration for eager pipeline

Usage

To use, run the pipeline with -profile shh.

This will download and launch the eager specific shh.config which has been pre-configured with a setup suitable for the shh cluster.

Example: nextflow run nf-core/eager -profile shh

eager specific configurations for shh

Specific configurations for shh has been made for eager.

• Running with the MALT module turned on, will by default be sent either to long or supercruncher queues with a minimum of 756GB and 64 cores.