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nf-core/configs: LUGH configuration
To use the lugh configuration profile with your pipeline, add -profile lugh to your nextflow run command. Please take care to use the -bg flag or run the job on a compute node. DO NOT RUN ANALYSES ON THE HEAD NODE.
The configuration file will load prerequisite modules for users, however it is entirely up to the user to have a functional version of nextflow installed in their path.
Lugh has 3 queues:
* `MSC`: compute0{1..3}, 16 cpus, 32GB memory (Please reserve for MSc students only)
* `normal`: compute{10..29}, 16 cpus, 64GB memory.
& `highmem`: compute0{4..9}, 32 cpus, 128GB memory.
The configuration profile design is very simple. If your process exceeds 64GB memory or 16 cpus, it is sent to the highmem queue. Else, normal.
Whilst I (@BarryDigby) am happy to help people set up their nextflow pipelines, please note that I am not the system administrator.
Container Cache
Your workflow containers will be downloaded and stored at /data/containers which is accessible to all users.