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This environment variable needs to be set in order to prevent memory allocation errors in the MAKEBLASTDB process.
13 lines
270 B
Text
13 lines
270 B
Text
env {
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BLASTDB_LMDB_MAP_SIZE=100000000
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}
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process {
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withName : '.*PICARD.*' {
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clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"}
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}
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withName : '.*SNPEFF.*' {
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clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"}
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}
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}
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