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nf-configs/docs/pipeline/rnafusion/munin.md

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nf-core/configs: MUNIN rnafusion specific configuration

Extra specific configuration for rnafusion pipeline

Usage

To use, run the pipeline with -profile munin.

This will download and launch the rnafusion specific munin.config which has been pre-configured with a setup suitable for the MUNIN cluster.

Example: nextflow run nf-core/rnafusion -profile munin

rnafusion specific configurations for MUNIN

Specific configurations for MUNIN has been made for rnafusion.

  • cpus, memory and time max requirements.
  • Paths to specific containers
  • Paths to specific references and indexes