1.4 KiB
nf-core/configs: azurebatch Configuration
To be used with the azurebatch profile by specifying the -profile azurebatch when running nf-core pipelines.
Custom queue and storage need to be supplied with params.az_location, params.batch_name, params.batch_key, params.storage_name, params.sas_token.
Required Parameters
--az_location
The Azure Batch region where the computation is executed in VMs. Default (westus2).
--batch_name
The Azure Batch account name.
--batch_key
The Azure Batch account key.
--storage_name
The Azure Blob Storage name. Example is currently Illumina Platinum Genomes. This must be changed to your specific storage account.
--sas_token
The Azure Blob Storage shared access signature token. Example is currently Illumina Platinum Genomes. This must be changed to your specific storage account.
Optional Parameters
--work_dir
The Azure Blob container to be used as Nextflow work directory. Can also be specified with (-w az://work).
Azure Batch Setup
Please refer to the Nextflow documentation which describe how to setup the Azure Batch environment.