1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-09-21 14:02:05 +00:00
nf-configs/docs/ccga_dx.md
2022-03-21 19:23:28 -05:00

9 lines
695 B
Markdown

# nf-core/configs: CCGA DX Configuration
Deployment and testing of nf-core pipelines at the CCGA DX cluster is on-going.
To use, run the pipeline with `-profile ccga_dx`. This will download and launch the [`ccga_dx.config`](../conf/ccga_dx.config) which has been pre-configured with a setup suitable for the CCGA cluster. Using this profile, a docker image containing all of the required software will be downloaded, and converted to a Singularity image before execution of the pipeline.
Before running the pipeline you will need to have Nextflow installed.
> NB: Access to the CCGA DX cluster is restricted to IKMB/CCGA employes. Please talk to Marc Hoeppner to get access (@marchoeppner).