mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-26 01:39:55 +00:00
24 lines
532 B
Markdown
Executable file
24 lines
532 B
Markdown
Executable file
# nf-core/configs: Crick eager specific configuration
|
|
|
|
Extra specific configuration for eager pipeline
|
|
|
|
## Usage
|
|
|
|
To use, run the pipeline with `-profile crick`.
|
|
|
|
This will download and launch the eager specific [`crick.config`](../../../conf/pipeline/eager/crick.config) which is adapted to data generated at the Crick and
|
|
processed on the Crick's HPC.
|
|
|
|
Example: `nextflow run nf-core/eager -profile crick`
|
|
|
|
### screening
|
|
|
|
- Low coverage data.
|
|
|
|
### production
|
|
|
|
- High coverage data.
|
|
|
|
### external
|
|
|
|
- External higher coverage data.
|