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765 B
765 B
nf-core/configs: eva taxprofiler specific configuration
Extra specific configuration for taxprofiler pipeline
Usage
To use, run the pipeline with -profile eva
.
This will download and launch the taxprofiler specific eva.config
which has been pre-configured with a setup suitable for the MPI-EVA cluster.
Example: nextflow run nf-core/taxprofiler -profile eva
taxprofiler specific configurations for eva
Specific configurations for eva has been made for taxprofiler.
General profiles
- The general MPI-EVA profile runs with default nf-core/taxprofiler parameters, but with modifications to account for issues SGE have with Java and python tools, nameling: BBDUK, MALT, MetaPhlAn3, and MEGAN