1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-25 17:29:55 +00:00
nf-configs/docs/pipeline/mag/eva.md
James A. Fellows Yates 97d57539e3
Apply suggestions from code review
Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>
2022-06-03 12:51:20 +02:00

15 lines
552 B
Markdown

# nf-core/configs: eva mag specific configuration
Extra specific configuration for mag pipeline
## Usage
To use, run the pipeline with `-profile eva`.
This will download and launch the mag specific [`eva.config`](../../../conf/pipeline/mag/eva.config) which has been pre-configured with a setup suitable for the MPI-EVA cluster.
Example: `nextflow run nf-core/mag -profile eva`
## mag specific configurations for eva
Specific configurations for eva has been made for mag, primarily adjusting SGE memory requirements of Java tools (e.g. FastQC).