mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-12-23 10:58:16 +00:00
37 lines
766 B
Text
37 lines
766 B
Text
//Profile config names for nf-core/configs
|
|
|
|
params {
|
|
// Config Params
|
|
config_profile_description = 'Imperial College London - HPC Profile -- provided by nf-core/configs.'
|
|
config_profile_contact = 'Combiz Khozoie (c.khozoie@imperial.ac.uk)'
|
|
config_profile_url = 'https://www.imperial.ac.uk/admin-services/ict/self-service/research-support/rcs/'
|
|
|
|
// Resources
|
|
max_memory = 256.GB
|
|
max_cpus = 32
|
|
max_time = 72.h
|
|
}
|
|
|
|
executor {
|
|
$pbspro {
|
|
queueSize = 50
|
|
}
|
|
|
|
$local {
|
|
cpus = 2
|
|
queueSize = 1
|
|
memory = '32 GB'
|
|
}
|
|
}
|
|
|
|
singularity {
|
|
enabled = true
|
|
autoMounts = true
|
|
runOptions = "-B /rds/,/rdsgpfs/,/rds/general/user/$USER/ephemeral/tmp/:/tmp,/rds/general/user/$USER/ephemeral/tmp/:/var/tmp"
|
|
}
|
|
|
|
process {
|
|
|
|
executor = 'pbspro'
|
|
|
|
}
|