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nf-configs/conf/hebbe.config
phue 18ed48f398 deprecate igenomesIgnore in favor of igenomes_ignore
keep both for now until all the pipelines have been synced
2019-10-28 11:38:24 +01:00

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//Profile config names for nf-core/configs
params {
config_profile_description = 'Gothenburg Hebbe cluster profile provided by nf-core/configs.'
config_profile_contact = 'Phil Ewels (@ewels)'
config_profile_url = 'http://www.c3se.chalmers.se/index.php/Hebbe'
}
singularity {
enabled = true
}
process {
executor = 'slurm'
clusterOptions = { "-A $params.project ${params.clusterOptions ?: ''}" }
/* The Hebbe scheduler fails if you try to request an amount of memory for a job */
withName: '*' { memory = null }
}
params {
igenomes_ignore = true
igenomesIgnore = true //deprecated
saveReference = true
max_memory = 64.GB
max_cpus = 20
max_time = 240.h
}