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18 lines
560 B
Text
18 lines
560 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { PEDDY } from '../../../modules/peddy/main.nf' addParams( options: [:] )
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workflow test_peddy {
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input = [
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[ id:'test', single_end:false ],
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file(params.test_data['homo_sapiens']['genome']['justhusky_minimal_vcf_gz'], checkIfExists: true),
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file(params.test_data['homo_sapiens']['genome']['justhusky_minimal_vcf_gz_tbi'], checkIfExists: true)
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]
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ped = file(params.test_data['homo_sapiens']['genome']['justhusky_ped'], checkIfExists: true)
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PEDDY ( input , ped )
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}
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