nf-core_modules/tests/software/bedtools/slop/main.nf

16 lines
443 B
Text
Raw Normal View History

2021-01-29 22:38:35 -05:00
#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
2021-01-29 23:12:14 -05:00
include { BEDTOOLS_SLOP } from '../../../../software/bedtools/slop/main.nf' addParams( options: [args: '-l 15 -r 30'] )
2021-01-29 22:38:35 -05:00
workflow test_bedtools_slop {
def input = []
input = [ [ id:'test'],
file("${launchDir}/tests/data/bed/A.bed", checkIfExists: true),
file("${launchDir}/tests/data/bed/genome.sizes", checkIfExists: true) ]
2021-01-29 22:38:35 -05:00
BEDTOOLS_SLOP( input )
}