nf-core_modules/tests/modules/hamronization/fargene/test.yml

- name: hamronization fargene test_hamronization_fargene
  command: nextflow run ./tests/modules/hamronization/fargene -entry test_hamronization_fargene -c ./tests/config/nextflow.config  -c ./tests/modules/hamronization/fargene/nextflow.config
  tags:
    - hamronization
    - hamronization/fargene
  files:
    - path: output/hamronization/test.tsv
Add HAMRONIZATION/FARGENE and updates all HARMONIZATION tools to 1.1.1 (#2107) * Update main.nf * Update meta.yml * Re-add logos as not staged in a way that works with MultiQC config files * Update main.nf * Remove now unnecessary input channel * Remove unused channel from tests * Update hAMRonization to 1.1.1 and add hAMRonization farGene * Fix hamronizatio ntests * Prettier * Fix fargene linting * Correct file * Fix fargene output * Apply suggestions from code review Co-authored-by: Jasmin F <73216762+jasmezz@users.noreply.github.com> * Fix summarise tests * Prettier Co-authored-by: Jasmin F <73216762+jasmezz@users.noreply.github.com> 2022-09-27 13:32:18 +00:00			`- name: hamronization fargene test_hamronization_fargene`
			`command: nextflow run ./tests/modules/hamronization/fargene -entry test_hamronization_fargene -c ./tests/config/nextflow.config -c ./tests/modules/hamronization/fargene/nextflow.config`
			`tags:`
			`- hamronization`
			`- hamronization/fargene`
			`files:`
			`- path: output/hamronization/test.tsv`