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13 lines
440 B
Text
13 lines
440 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { VSEARCH_USEARCHGLOBAL } from '../../../../modules/vsearch/usearchglobal/main.nf'
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workflow test_vsearch_usearchglobal {
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query = file(params.test_data['sarscov2']['genome']['transcriptome_fasta'], checkIfExists: true)
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db = file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true)
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VSEARCH_USEARCHGLOBAL ( query, db, "blast6out_results" )
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}
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