nf-core_modules/tests/modules/gatk4/markduplicates/test.yml

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- name: gatk4 markduplicates test_gatk4_markduplicates
command: nextflow run tests/modules/gatk4/markduplicates -entry test_gatk4_markduplicates -c tests/config/nextflow.config -c ./tests/modules/gatk4/markduplicates/nextflow.config
tags:
- gatk4
- gatk4/markduplicates
files:
- path: output/gatk4/test.bai
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md5sum: c8f7a9e426c768577f88f59cb1336bf3
- path: output/gatk4/test.bam
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md5sum: 58533ddab47f7ac07f7b10e7f4aac234
- path: output/gatk4/test.metrics
- path: output/gatk4/versions.yml
- name: gatk4 markduplicates test_gatk4_markduplicates_multiple_bams
command: nextflow run tests/modules/gatk4/markduplicates -entry test_gatk4_markduplicates_multiple_bams -c tests/config/nextflow.config -c ./tests/modules/gatk4/markduplicates/nextflow.config
tags:
- gatk4
- gatk4/markduplicates
files:
- path: output/gatk4/test.bai
md5sum: bad71df9c876e72a5bc0a3e0fd755f92
- path: output/gatk4/test.bam
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md5sum: 112580c24b43331950f24f9adea30788
- path: output/gatk4/test.metrics
- path: output/gatk4/versions.yml