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42 lines
1.1 KiB
YAML
42 lines
1.1 KiB
YAML
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name: "slimfastq"
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description: Fast, efficient, lossless compression of FASTQ files.
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keywords:
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- FASTQ
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- compression
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- lossless
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tools:
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- "slimfastq":
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description: "slimfastq efficiently compresses/decompresses FASTQ files"
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homepage: "https://github.com/Infinidat/slimfastq"
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tool_dev_url: "https://github.com/Infinidat/slimfastq"
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licence: "['BSD-3-clause']"
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- fastq:
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type: file
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description: Either a single-end FASTQ file or paired-end files.
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pattern: "*.{fq.gz,fastq.gz}"
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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- sfq:
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type: file
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description: Either one or two sequence files in slimfastq compressed format.
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pattern: "*.{sfq}"
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authors:
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- "@Midnighter"
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