nf-core_modules/tests/modules/bwa/aln/test.yml

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- name: bwa aln single-end
command: nextflow run ./tests/modules/bwa/aln -entry test_bwa_aln_single_end -c tests/config/nextflow.config
tags:
- bwa
- bwa/aln
files:
- path: ./output/bwa/test.sai
md5sum: aaaf39b6814c96ca1a5eacc662adf926
- path: ./output/index/bwa/genome.bwt
md5sum: 0469c30a1e239dd08f68afe66fde99da
- path: ./output/index/bwa/genome.amb
md5sum: 3a68b8b2287e07dd3f5f95f4344ba76e
- path: ./output/index/bwa/genome.ann
md5sum: c32e11f6c859f166c7525a9c1d583567
- path: ./output/index/bwa/genome.pac
md5sum: 983e3d2cd6f36e2546e6d25a0da78d66
- path: ./output/index/bwa/genome.sa
md5sum: ab3952cabf026b48cd3eb5bccbb636d1
- name: bwa aln paired-end
command: nextflow run ./tests/modules/bwa/aln -entry test_bwa_aln_paired_end -c tests/config/nextflow.config
tags:
- bwa
- bwa/aln
files:
- path: ./output/bwa/test.1.sai
md5sum: aaaf39b6814c96ca1a5eacc662adf926
- path: ./output/bwa/test.2.sai
md5sum: b4f185d9b4cb256dd5c377070a536124
- path: ./output/index/bwa/genome.bwt
md5sum: 0469c30a1e239dd08f68afe66fde99da
- path: ./output/index/bwa/genome.amb
md5sum: 3a68b8b2287e07dd3f5f95f4344ba76e
- path: ./output/index/bwa/genome.ann
md5sum: c32e11f6c859f166c7525a9c1d583567
- path: ./output/index/bwa/genome.pac
md5sum: 983e3d2cd6f36e2546e6d25a0da78d66
- path: ./output/index/bwa/genome.sa
md5sum: ab3952cabf026b48cd3eb5bccbb636d1