nf-core_modules/tests/software/gatk4/fastqtosam/test.yml

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- name: gatk4 fastqtosam test_gatk4_fastqtosam_single_end
command: nextflow run tests/software/gatk4/fastqtosam -entry test_gatk4_fastqtosam_single_end -c tests/config/nextflow.config
tags:
- gatk4_fastqtosam_single_end
- gatk4_fastqtosam
- gatk4
files:
- path: output/gatk4/test.bam
md5sum: 4967100b2e4912c0e4ce0976d946bafb
- name: gatk4 fastqtosam test_gatk4_fastqtosam_paired_end
command: nextflow run tests/software/gatk4/fastqtosam -entry test_gatk4_fastqtosam_paired_end -c tests/config/nextflow.config
tags:
- gatk4_fastqtosam_paired_end
- gatk4_fastqtosam
- gatk4
files:
- path: output/gatk4/test.bam
md5sum: 4967100b2e4912c0e4ce0976d946bafb