nf-core_modules/modules/fasttree/meta.yml

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name: fasttree
description: Produces a Newick format phylogeny from a multiple sequence alignment. Capable of bacterial genome size alignments.
keywords:
- phylogeny
- newick
tools:
- fasttree:
description: FastTree infers approximately-maximum-likelihood phylogenetic trees from alignments of nucleotide or protein sequences
homepage: http://www.microbesonline.org/fasttree/
documentation: http://www.microbesonline.org/fasttree/#Usage
tool_dev_url: None
doi: ""
licence: ["GPL v2"]
input:
- alignment:
type: file
description: A FASTA format multiple sequence alignment file
pattern: "*.{fasta,fas,fa,mfa}"
output:
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
- phylogeny:
type: file
description: A phylogeny in Newick format
pattern: "*.{tre}"
authors:
- "@aunderwo"