mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 07:42:05 +00:00
43 lines
1.1 KiB
YAML
43 lines
1.1 KiB
YAML
|
name: "tailfindr"
|
||
|
|
description: Estimating poly(A)-tail lengths from basecalled fast5 files produced by Nanopore sequencing of RNA and DNA
|
||
|
|
keywords:
|
||
|
|
- polyA
|
||
|
|
- fast5
|
||
|
|
tools:
|
||
|
|
- "tailfindr":
|
||
|
|
description: "An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads."
|
||
|
|
homepage: "https://github.com/adnaniazi/tailfindr"
|
||
|
|
documentation: "https://github.com/adnaniazi/tailfindr/blob/master/README.md"
|
||
|
|
tool_dev_url: "https://github.com/adnaniazi/tailfindr"
|
||
|
|
doi: "10.1261/rna.071332.119"
|
||
|
|
licence: "['AGPL v3']"
|
||
|
|
|
||
|
|
input:
|
||
|
|
- meta:
|
||
|
|
type: map
|
||
|
|
description: |
|
||
|
|
Groovy Map containing sample information
|
||
|
|
e.g. [ id:'test' ]
|
||
|
|
- fast5:
|
||
|
|
type: file
|
||
|
|
description: fast5 file
|
||
|
|
pattern: "*.fast5"
|
||
|
|
|
||
|
|
output:
|
||
|
|
- meta:
|
||
|
|
type: map
|
||
|
|
description: |
|
||
|
|
Groovy Map containing sample information
|
||
|
|
e.g. [ id:'test' ]
|
||
|
|
- versions:
|
||
|
|
type: file
|
||
|
|
description: File containing software versions
|
||
|
|
pattern: "versions.yml"
|
||
|
|
- csv_gz:
|
||
|
|
type: file
|
||
|
|
description: Compressed csv file
|
||
|
|
pattern: "*.csv.gz"
|
||
|
|
|
||
|
|
authors:
|
||
|
|
- "@lucacozzuto"
|